TAG SNP SELECTION USING CLONAL SELECTION ALGORITHM BASED ON SUPPORT VECTOR MACHINE

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dc.contributor.authorIlhan, Ilhan
dc.contributor.authorGoktepe, Yunus Emre
dc.contributor.authorOzcan, Cengiz
dc.contributor.authorKahramanli, Sirzat
dc.date.accessioned2020-03-26T18:16:30Z
dc.date.available2020-03-26T18:16:30Z
dc.date.issued2011
dc.departmentSelçuk Üniversitesien_US
dc.description3rd International Conference on Future Computer and Communication (ICFCC 2011) -- JUN 03-05, 2011 -- G Enescu Univ Arts, Iasi, ROMANIAen_US
dc.description.abstractInvestigations on genetic variants associated with complex diseases are important for enhancements in diagnosis and treatments. SNPs (Single Nucleotide Polymorphisms), which comprise most of the millions of changes in human genome, are promising tools for disease-gene association studies. On the other hand, these studies are limited by cost of genotyping tremendous number of SNPs. Therefore, it is essential to identify a subset of SNPs that represents rest of the SNPs. As subset of SNPs is identified, data set should be searched as well as possible. In this study, a new method called CLONTagger was introduced, where Support Vector Machine (SVM) was used as SNP prediction method, whereas Clonal Selection Algorithm (CLONALG) was used as tag SNP selection method. The suggested method was compared with current tag SNP selection algorithms in literature using different datasets. Experimental results demonstrated that the suggested method could identify tag SNPs with better prediction accuracy than other methods from literature.en_US
dc.description.sponsorshipIACSIT, Huazhong Normal Univ, Univ Putra Malaysiaen_US
dc.identifier.endpage+en_US
dc.identifier.isbn978-0-7918-5971-1
dc.identifier.startpage47en_US
dc.identifier.urihttps://hdl.handle.net/20.500.12395/26879
dc.identifier.wosWOS:000320410200008en_US
dc.identifier.wosqualityN/Aen_US
dc.indekslendigikaynakWeb of Scienceen_US
dc.language.isoenen_US
dc.publisherAMER SOC MECHANICAL ENGINEERSen_US
dc.relation.ispartofPROCEEDINGS OF THE 2011 3RD INTERNATIONAL CONFERENCE ON FUTURE COMPUTER AND COMMUNICATION (ICFCC 2011)en_US
dc.relation.publicationcategoryKonferans Öğesi - Uluslararası - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.selcuk20240510_oaigen_US
dc.subjectSingle Nucleotide Polymorphisms (SNPs)en_US
dc.subjectTag SNPsen_US
dc.subjectClonal Selection Algorithm (CLONALG)en_US
dc.subjectSupport Vector Machine (SVM)en_US
dc.titleTAG SNP SELECTION USING CLONAL SELECTION ALGORITHM BASED ON SUPPORT VECTOR MACHINEen_US
dc.typeConference Objecten_US

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